Go Forth and Multiply: How Y-Chromosomal Adam and Mitochondrial Eve spread their DNA to every currently living human

There are seven billion people alive today. The bible has been telling us for over a thousand years that every one of them is descended from just two humans, Adam and Eve. It’s interesting how often old stories we used to explain our world before science can strike a grain of truth! DNA that is passed from father to son on the Y chromosome, and mitochondrial DNA that is inherited from one’s mother, can both be traced back to single points of origin. As our understanding of population genetics in the world today grows, we get closer and closer to identifying our last common ancestors.

eveil

This is the best bio-biblical pun you will see today

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23andMe: With Big Data comes Big Responsibility

23andMe – the home genetic testing company backed by Google – have announced they want to use their data for drug development. I think this is a great idea, but a very important time for Google to remember their “Don’t be evil” policy.

What is 23andMe?

23andMe offer mail-order personal genome sequencing: you’re sent the kit, you take a swab of DNA from inside your cheek, send it back and wait for a copy of your own blueprints to appear online. What an age to live in! The data comes in the form of a ‘SNP panel’, meaning it tests for a long list of known single nucleotide changes that are common in the general population. The unique pattern of SNPs you have inherited can show you your ancestors paths across the world, as well as identify some nasty diseases you may carry or be predisposed to.

A South-African colleague of mine took one of the tests for fun. He was pleasantly surprised to find that the family rumour that his great-great-great grandmother was black were true, and that his whole family had inherited some of her black-african SNP pattern. He took great pleasure in announcing this at a family gathering, in front of some unpleasant racist relatives. Nothing annoys bigots like scientific proof that they’re ideas are bad and they should feel bad!

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Brothers from Anotha Taxa: How Much DNA do Humans Share with Dinosaurs?

Brothers from Anotha Taxa: How Much DNA do Humans Share with Dinosaurs?

Dinosaurs were the most awesome things to ever stomp the earth. I bet every one of us has wished at least once to have seen an Apatosaurus or T-Rex in the flesh, that’s why Jurassic Park is still constantly on TV  22 years after its release. Last year, scientists activated some ancient dinosaur genes lying dormant in their most disappointing descendent – the chicken – causing them to take on some dinosaur-like attributes. Humans are not descendants of dinosaurs, but we do share some common ancestors. How much DNA could the square and lowly Homo sapiens have in common with the rockstars of terrestrial life?

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Why do drug resistant strains of Malaria keep emerging from the same piece of jungle?

It’s rare that we stop and reflect on the sheer horror of life just 100 years ago before antibiotics, vaccines and sterile technique were commonplace. In those days, every meal was a game of Russian roulette with E.Coli and every sniffle from a child could spell their imminent demise. The 20th century has been a relatively safe haven from pathogens, but that might all come to an end soon, as drug-resistant diseases become more and more common, thanks to our misuse of medicine.

Over the years, multiple attempts have been made to eradicate Malaria, a disease responsible for millions of deaths. All attempts to date have failed, and malaria still affects an estimated 200 million people each year. This disease is becoming alarmingly adept at developing resistance to whatever drugs are thrown at it. Why is this, and why can all the drug resistant strains of malaria be traced back to the same point of origin – remote jungle regions of western Cambodia?

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PRDM9: My Favourite Gene

PRDM9 is my favourite gene. Why? Because it is the strongest driver of speciation identified to date. Thanks to the activity of PRDM9 (and probably some other similar genes we haven’t recognised yet), we live in a world full of awesome metazoans such as hedgehogs, dragonflies, narwhals and axylotils. The gene was tricky to find and it’s function is still not completely understood. Here, I will explain the story of it’s discovery, what we think it does, and why that’s awesome.

Pearson Scott Foresman, donated to the Wikimedia Foundation

PRDM9 was only identified quite recently by scientists trying to understand the process of genetic recombination. [Recap paragraph!]: In my last post I spoke at length about how chromosomes can swap pieces of DNA with one another during cell division. I mostly talked about ‘non-homologous recombination’, where two chromosomes swap non-matching pieces of DNA with one another, one chromosome often completely losing vital genes and it’s counterpart gaining extras. Non-homologous recombination often causes disease, so why haven’t we evolved out of it? The reason is that homologous recombination – where two chromosomes swap like-for-like stretches of DNA – is an integral part of evolution, as it allows species to ‘shuffle’ different variations of genes and see which combinations work best together. The question is, what controls recombination? How does it happen?

recombinationz

Recombination: The process by which two chromosomes swap chunks of DNA with one another

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Mutation: Not That Random?

Mutation is usually considered to be a random, uncontrolled process: Mistakes during replication cause random changes to the DNA sequence, which may have positive, negative or neutral effects on the organism’s survivability. Positive changes are sustained, negative mutations die off, neutral mutations just float about. Mounting evidence now suggests that mutation can also happen on a far grander scale than this, that the changes are not always randomly located, and that they may not be mistakes at all.

Brokechromo

Evolution is not content with changing a species one base at a time: mutation can actually cause huge genetic changes over just a single generation. Whether these changes are adopted by the whole species (becoming ‘fixed’) is another matter, but it seems that rather than progressing via a gentle trickle of subtle changes, species try out all these small mutations in different combinations, shuffling their genomes about like a deck of cards.

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Be The Smuggest Parent: Attainable X-Men Powers For Your Awesome Designer Baby

Although I was unjustly robbed of victory in the I’m a Scientist – Get Me Out of Here! Science communication challenge a few weeks ago, I did get to field a lot of great genetics questions from schoolkids. I would say about 80% of them related to the acquisition of mutant superpowers. Most mutant superheroes have powers beyond the scope of what you can achieve through mutation in the real world. On the other hand, some super traits actually do crop up occasionally, and others would definitely be achievable with a little dabbling…

Powers you can’t have

Powers causing really complicated modifications (like X-Man Angel’s wings) are a no-go because they would require a whole new set of genes working in harmony. Whole new neural subroutines and developmental changes could be necessary, making this a tall order to fill. This is not something you can acquire through a random mistake. Genetics is also cruelly shackled to the limits of physics, space and time. This rules out many of the cooler powers possessed by the likes of Storm, Cyclops and Polaris. Most of the bigshot superheroes spend a lot of their time bitching about the burderns of their powers anyway, so maybe it isn’t that great a loss to us after all.

Powers you can have:

All sorts of weird mutations crop up naturally all the time. In most cases they are debilitating – it’s far more likely that a typo in a computer program will mess it up rather than make it more efficient, and it’s the same with genes and proteins. A useful aspect to these mutations is that they tell us what a now broken gene was supposed to be doing in the first place, which can be very hard to figure out otherwise. Once we know what a gene does – be it from an animal or a human – we can start meddling. As all the hand-wringing Daily Mail readers out there tell us, the inevitable result of genetic meddling will be ‘designer babies’. Most of us are pretty on board with the current scope of this: procedures such as selecting for an egg cell which isn’t affected by a horrendous genetic disease from an affected/carrier mother, fertilizing it and re-implanting it by IVF to make a nice healthy child. Really though, why should we stop there? What kind of person would go to the trouble of making a designer baby that didn’t have super awesome mutant powers?? How else are you supposed to guarantee that your kid is better than all the other little screamers? Sure, you could make them tall and blue eyed if you want, but that’s so unimaginative. Therefore, allow me to present my catalogue of totally achievable mutant superpowers you can give your designer baby, mostly from the X-Men universe.

(If you can think of any other series with a good stock of supermutants comment it up and I’ll add them in)

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